Hs04408180_m1

• Gene Symbol: LOC100288866
• Gene Name: uncharacterized LOC100288866
• Gene Aliases: -
• Chromosome Location: Chr.17: 49505657 - 49574064 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LOC100288866
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_103773.1		1 - 2	245		93
GenBank mRNA	AK303671.1	-	1 - 2	245		93

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DC411135.1	-	1 - 2	245		Chr. 17 - 49506310 - 49574064 [-] on Build GRCh38	93

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 6165	MIR6165	hsa-mir-6165	-83.0	Anti-sense	Chr. 17 - 49510817 - 49510900 on NCBI Build GRCh38
Downstream	neurexophilin 3	NXPH3	NPH3	1.9kb	Anti-sense	Chr. 17 - 49575936 - 49583810 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700011051.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK303671.1 transcripts.

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1700011051.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011051.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011051.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011051.hg.1	NR_103773.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011051.hg.1	NR_103773.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011051.hg.1	NR_103773.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011051.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011051.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011051.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011051.hg.1	NR_103773.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011051.hg.1	NR_103773.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011051.hg.1	NR_103773.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700188885.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700188885.hg.1	NR_103773.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700188885.hg.1	TC1700011051.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700188885.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700188885.hg.1	NR_103773.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700188884.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700188884.hg.1	NR_103773.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700188884.hg.1	TC1700011051.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700188884.hg.1	ENST00000514506.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700188884.hg.1	NR_103773.1	Refseq