Hs04408353_m1

• Gene Symbol: CASC17
• Gene Name: cancer susceptibility candidate 17 (non-protein coding)
• Gene Aliases: LINC00600
• Chromosome Location: Chr.17: 71097774 - 71202179 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CASC17
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104152.1		1 - 2	73		99
GenBank mRNA	BC039327.1	-	1 - 2	71		99
	BI459971.1	-	1 - 2	76		99

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	potassium voltage-gated channel subfamily J member 2	KCNJ2	ATFB9, HHBIRK1, HHIRK1, IRK1, KIR2.1, LQT7, SQT3	-1.0mb	Anti-sense	Chr. 17 - 70169535 - 70180044 on NCBI Build GRCh38
Downstream	uncharacterized LOC102723505	LOC102723505		819.7kb	Sense	Chr. 17 - 72021851 - 72025979 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700011609.hg.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194070.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194070.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194070.hg.1	TC1700011609.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194070.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194070.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011609.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194073.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194073.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194073.hg.1	TC1700011609.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194073.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194073.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194071.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194071.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194071.hg.1	TC1700011609.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194071.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194071.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194077.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194077.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194077.hg.1	TC1700011609.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194077.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194077.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194075.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194075.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194075.hg.1	TC1700011609.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194075.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194075.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194069.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194069.hg.1	NR_104152.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194069.hg.1	TC1700011609.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194069.hg.1	ENST00000569074.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194069.hg.1	NR_104152.1	Refseq