Hs04408952_s1

• Gene Symbol: ST3GAL5-AS1
• Gene Name: ST3GAL5 antisense RNA 1 (head to head)
• Gene Aliases: -
• Chromosome Location: Chr.2: 85889280 - 85892252 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ST3GAL5-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110569.1		1	417		92
GenBank mRNA	BC036617.2	-	1	417		92
	BC056236.1	-	1	421		92
	BI544720.1	-	1	422		92

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB501275.1	-	1	394		Chr. 2 - 85889303 - 85889790 [+] on Build GRCh38	92
GenBankmRNA	DB155548.1	-	1	428		Chr. 2 - 85889270 - 85889850 [+] on Build GRCh38	92
GenBankmRNA	DB500678.1	-	1	394		Chr. 2 - 85889303 - 85889766 [+] on Build GRCh38	92
GenBankmRNA	DB498182.1	-	1	394		Chr. 2 - 85889303 - 85889798 [+] on Build GRCh38	92

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ST3 beta-galactoside alpha-2,3-sialyltransferase 5	ST3GAL5	SATI, SIAT9, SIATGM3S, ST3GalV	-246.0	Anti-sense	Chr. 2 - 85839148 - 85889034 on NCBI Build GRCh38
Downstream	uncharacterized LOC90784	LOC90784		130.4kb	Anti-sense	Chr. 2 - 86020216 - 86023868 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200008273.hg.1

• Set Membership: Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	ENST00000608140.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	ENST00000608140.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008273.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157417.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157417.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157417.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157417.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157417.hg.1	TC0200008273.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200157419.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157419.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157419.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157419.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157419.hg.1	TC0200008273.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200157420.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157420.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157420.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157420.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157420.hg.1	TC0200008273.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200157418.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157418.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157418.hg.1	ENST00000455121.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0200157418.hg.1	NR_110569.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200157418.hg.1	TC0200008273.hg.1	Clariom D TC