Hs04415877_s1

• Gene Symbol: CACNA1C-AS2
• Gene Name: CACNA1C antisense RNA 2
• Gene Aliases: -
• Chromosome Location: Chr.12: 2668500 - 2672220 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CACNA1C-AS2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046579.1		2	177		132
GenBank mRNA	AI219155.1	-	1			132
	AI797712.1	-	1			132

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI267754.1	-	1			Chr. 12 - 2668787 - 2669018 [-] on Build GRCh38	132
GenBankmRNA	AW173240.1	-	1			Chr. 12 - 2668500 - 2669021 [+] on Build GRCh38	132

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	CACNA1C intronic transcript 3	CACNA1C-IT3		-379.8kb	Anti-sense	Chr. 12 - 2269776 - 2288745 on NCBI Build GRCh38
Downstream	CACNA1C antisense RNA 1	CACNA1C-AS1		7.0kb	Sense	Chr. 12 - 2676001 - 2691157 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200009607.hg.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	NR_046579.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	TC1200009607.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	TC1200009607.hg.1	Clariom D TC