Hs99999093_m1

• Gene Symbol: CCL20
• Gene Name: C-C motif chemokine ligand 20
• Gene Aliases: CKb4, Exodus, LARC, MIP-3-alpha, MIP-3a, MIP3A, SCYA20, ST38
• Chromosome Location: Chr.2: 227813842 - 227817564 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CCL20
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004591.2	NP_004582.1	1 - 2	144		79
GenBank mRNA	D86955.1	-	1 - 2	132		79
	U77035.1	-	1 - 2	74		79

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200010980.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02001364.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CCL20

Panther Classification:

Molecular Function -

cytokine, intercellular signal molecule

Gene Ontology Categories:

Process(es)

monocyte chemotaxis
chemotaxis
inflammatory response
immune response
signal transduction
G-protein coupled receptor signaling pathway
cell-cell signaling
neutrophil chemotaxis
calcium-mediated signaling using intracellular calcium source
wound healing
defense response to bacterium
positive regulation of GTPase activity
lymphocyte chemotaxis
positive regulation of interleukin-1 alpha biosynthetic process
positive regulation of nitric-oxide synthase biosynthetic process
cell chemotaxis
chemokine-mediated signaling pathway
positive regulation of ERK1 and ERK2 cascade
cellular response to lipopolysaccharide
cellular response to lipoteichoic acid
cellular response to interferon-gamma
cellular response to interleukin-1
cellular response to tumor necrosis factor
T cell migration
thymocyte migration
positive regulation of T cell migration

Function(s)

protein binding
chemokine activity
CCR6 chemokine receptor binding
CCR chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02021353.hg.1	TC02001364.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02021353.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021353.hg.1	ENST00000409189.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021353.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021353.hg.1	NM_001130046.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02021353.hg.1	NM_004591.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200178732.hg.1	TC0200010980.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000358813.4	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000409189.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000473642.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	ENST00000489160.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_001130046.1	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_004591.2	Refseq
Affymetrix Human Clariom D Assay	TC0200010980.hg.1	NM_004591.2	Refseq