Assay Details

Gene Symbol: CXCR5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001716.4	NP_001707.1	2	810		67
RefSeq	NM_032966.2	NP_116743.1	1	787		67
GenBank mRNA	AK291512.1	-	2	810		67
	BC110352.1	-	2	724	5219901	67
	CO958128.1	-	1			67
	X68149.1	-	2	718		67
	X68829.1	-	1	787		67

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100009225.hg.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

G-protein coupled receptor

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CXCR5

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000530293.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000530293.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	ENST00000530293.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000334801.7	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000527266.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000530293.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000530293.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	ENST00000530293.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	TC1100013230.hg.1	NM_182557.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100168826.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168826.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168826.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100168826.hg.1	TC1100009225.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100168826.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100168826.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168826.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_032966.2	Refseq

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