Mm00432568_m1

• Gene Symbol: Clcn3
• Gene Name: chloride channel 3
• Gene Aliases: Clc3
• Chromosome Location: Chr.8: 60910389 - 60983311 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clcn3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_007711.3	NP_031737.1	6 - 7	1316		120
	NM_173873.1	NP_776298.1	7 - 8	1492		120
	NM_173874.1	NP_776299.1	7 - 8	1492		120
	NM_173876.3	NP_776301.1	6 - 7	1037		120
GenBank mRNA	AF029347.1	-	6 - 7	940		120
	AK141136.1	-	7 - 8	1430		120
	AK147364.1	-	6 - 7	1472		120
	AK147548.1	-	6 - 7	1474		120
	AK147621.1	-	6 - 7	1474		120
	AK149276.1	-	7 - 8	1031		120
	AK150688.1	-	7 - 8	1421		120
	AK159698.1	-	7 - 8	1466		120
	AK161327.1	-	7 - 8	1420		120
	AK162639.1	-	7 - 8	1433		120
	AK169297.1	-	7 - 8	1413		120
	AK169516.1	-	2 - 3	304		120
	BC057133.1	-	6 - 7	970	6833732	120
	BC057855.1	-	6 - 7	1132		120
	CF536658.1	-	3 - 4	463		120
	X78874.1	-	6 - 7	1141		120

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800002290.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Ion Channel, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Clcn3

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

transport
ion transport
chloride transport
phagocytosis, engulfment
adult locomotory behavior
regulation of ion transmembrane transport
synaptic transmission, glutamatergic
regulation of anion transport
photoreceptor cell maintenance
negative regulation of cell volume
synaptic transmission, GABAergic
transmembrane transport
neuron cellular homeostasis
synaptic vesicle lumen acidification
chloride transmembrane transport
positive regulation of reactive oxygen species biosynthetic process
regulation of anion transmembrane transport

Function(s)

nucleotide binding
ion channel activity
voltage-gated ion channel activity
voltage-gated chloride channel activity
chloride channel activity
ATP binding
antiporter activity
PDZ domain binding
protein heterodimerization activity
volume-sensitive chloride channel activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_007711.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_007711.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_173873.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_173873.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_173874.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_173874.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_173876.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	NM_173876.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017286.mm.1	TC0800002290.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_007711.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_007711.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_173873.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_173873.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_173874.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_173874.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_173876.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	NM_173876.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017288.mm.1	TC0800002290.mm.1	MTA TC