Mm00436458_m1

• Gene Symbol: Sema3a
• Gene Name: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
• Gene Aliases: Hsema-I, SEMA1, SemD, Semad, coll-1
• Chromosome Location: Chr.5: 13125371 - 13606234 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sema3a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001243072.1	NP_001230001.1	4 - 5	715		67
	NM_001243073.1	NP_001230002.1	4 - 5	555		67
	NM_009152.4	NP_033178.2	3 - 4	983		67
GenBank mRNA	AK053115.1	-	3 - 4	716		67
	AK140817.1	-	4 - 5	556		67
	AK164242.1	-	6 - 7	758		67
	BC057588.1	-	3 - 4	630	6416990	67
	BC090844.1	-	4 - 5	715	30532393	67
	D85028.2	-	3 - 4	985		67
	L41541.1	-	3 - 4	334		67
	X85993.1	-	3 - 4	444		67

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500000084.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sema3a

Panther Classification:

Molecular Function -

membrane-bound signaling molecule, intercellular signal molecule

Gene Ontology Categories:

Process(es)

neuron migration
regulation of heart rate
apoptotic process
multicellular organism development
nervous system development
axon guidance
axonal fasciculation
motor neuron axon guidance
negative regulation of epithelial cell migration
facial nerve structural organization
trigeminal nerve structural organization
nerve development
olfactory bulb development
branchiomotor neuron axon guidance
gonadotrophin-releasing hormone neuronal migration to the hypothalamus
cell differentiation
negative regulation of axon extension
ventral trunk neural crest cell migration
dendrite morphogenesis
regulation of axon extension involved in axon guidance
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
negative chemotaxis
axonogenesis involved in innervation
dichotomous subdivision of terminal units involved in salivary gland branching
sympathetic ganglion development
trigeminal ganglion development
semaphorin-plexin signaling pathway
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance
neural crest cell migration involved in sympathetic nervous system development
facioacoustic ganglion development
positive regulation of male gonad development
positive regulation of neuron migration

Function(s)

semaphorin receptor binding
neuropilin binding
chemorepellent activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0500000750.mm.1	TC0500000084.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500000750.mm.1	NM_001243072.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000750.mm.1	NM_001243072.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000750.mm.1	NM_001243073.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000750.mm.1	NM_001243073.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000750.mm.1	NM_009152.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000750.mm.1	NM_009152.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000751.mm.1	TC0500000084.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500000751.mm.1	NM_001243072.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000751.mm.1	NM_001243072.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000751.mm.1	NM_001243073.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000751.mm.1	NM_001243073.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000751.mm.1	NM_009152.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000751.mm.1	NM_009152.4	Refseq