Mm00438354_m1

• Gene Symbol: Cx3cr1
• Gene Name: chemokine (C-X3-C motif) receptor 1
• Gene Aliases: -
• Chromosome Location: Chr.9: 120048683 - 120068296 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cx3cr1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009987.4	NP_034117.3	1 - 2	92		70
GenBank mRNA	AF102269.1	-	1 - 2	86		70
	AK035902.1	-	1 - 2	67		70
	AK044557.1	-	1 - 2	93		70
	AK045634.1	-	1 - 2	80		70
	AK137388.1	-	1 - 2	80		70
	AK140010.1	-	1 - 2	66		70

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900003248.mm.1

Additional Information:

This assay is in the 5'UTR region of the AF102269.1,AK035902.1,AK044557.1,AK045634.1,AK137388.1,AK140010.1,NM_009987.4 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, G-protein coupled receptor, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cx3cr1

Gene Ontology Categories:

Process(es)

microglial cell activation
positive regulation of neuroblast proliferation
microglial cell activation involved in immune response
negative regulation of chronic inflammatory response to non-antigenic stimulus
chemotaxis
cell adhesion
signal transduction
G-protein coupled receptor signaling pathway
memory
negative regulation of angiogenesis
cytokine-mediated signaling pathway
cerebral cortex cell migration
negative regulation of cell migration
positive regulation of angiogenesis
macrophage chemotaxis
chemokine-mediated signaling pathway
negative regulation of long-term synaptic potentiation
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Function(s)

signal transducer activity
cytokine receptor activity
G-protein coupled receptor activity
chemokine receptor activity
C-X3-C chemokine receptor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0900027405.mm.1	NM_009987.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027405.mm.1	TC0900003248.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900027406.mm.1	NM_009987.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027406.mm.1	TC0900003248.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900027404.mm.1	NM_009987.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027404.mm.1	TC0900003248.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	394830	-	-