Mm00441533_g1 Best Coverage

• Gene Symbol: Snai1
• Gene Name: snail family zinc finger 1
• Gene Aliases: AI194338, Sna, Sna1, Snail, Snail1
• Chromosome Location: Chr.2: 167538227 - 167542814 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Snai1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011427.2	NP_035557.1	1 - 2	145		79
GenBank mRNA	BC034857.1	-	1 - 2	145	5121591	79
	CT010204.1	-	1 - 2	82		79
	CT010370.1	-	1 - 2	82		79
	M95604.1	-	1 - 2	96		79
	X67253.1	-	1 - 2	102		79

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200002589.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Snai1

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
mesoderm formation
epithelial to mesenchymal transition
epithelial to mesenchymal transition involved in endocardial cushion formation
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
multicellular organism development
mesoderm development
positive regulation of epithelial to mesenchymal transition
negative regulation of vitamin D biosynthetic process
cell migration
positive regulation of cell migration
hair follicle morphogenesis
negative regulation of DNA damage response, signal transduction by p53 class mediator
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
palate development
cartilage morphogenesis
trophoblast giant cell differentiation
negative regulation of cell differentiation involved in embryonic placenta development
left/right pattern formation
Notch signaling involved in heart development
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
regulation of bicellular tight junction assembly

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
nucleic acid binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
kinase binding
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200021358.mm.1	NM_011427.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200021358.mm.1	TC0200002589.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200021357.mm.1	NM_011427.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200021357.mm.1	TC0200002589.mm.1	MTA TC