Mm00443210_m1 Best Coverage

• Gene Symbol: Tcf4
• Gene Name: transcription factor 4
• Gene Aliases: 5730422P05Rik, ASP-I2, E2-2, E2.2, ITF-2, ITF-2b, ITF2, ME2, MITF-2A, MITF-2B, SEF-2, SEF2, SEF2-1, TFE, Tcf-4, bHLHb19
• Chromosome Location: Chr.18: 69344490 - 69687967 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tcf4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001083967.1	NP_001077436.1	16 - 17	1725		98
	NM_013685.2	NP_038713.1	16 - 17	2040		98
GenBank mRNA	AK014343.1	-	9 - 10	1109		98
	AK028748.1	-	16 - 17	1651		98
	AK081012.1	-	16 - 17	1677		98
	AK132140.1	-	9 - 10	1066		98
	AK133885.1	-	17 - 18	2452		98
	AK151433.1	-	9 - 10	1011		98
	BC014293.1	-	9 - 10		4014231	98
	BC043050.1	-	15 - 16	1500	5708370	98
	S75870.1	-	16 - 17	1612		98
	U16321.1	-	10 - 11	1099		98
	U16322.1	-	17 - 18	2012		98
	X91753.1	-	16 - 17	1664		98

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800000741.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tcf4

Panther Classification:

Molecular Function -

basic helix-loop-helix transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
DNA-templated transcription, initiation
regulation of transcription, DNA-templated
transcription initiation from RNA polymerase II promoter
multicellular organism development
nervous system development
cell differentiation
positive regulation of neuron differentiation
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
protein-DNA complex assembly

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcription factor activity, TFIIB-class binding
TFIIB-class transcription factor binding
DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
transcription corepressor activity
protein binding
protein C-terminus binding
protein homodimerization activity
bHLH transcription factor binding
protein heterodimerization activity
protein dimerization activity
E-box binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1800005411.mm.1	NM_001083967.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005411.mm.1	NM_001083967.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005411.mm.1	NM_013685.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005411.mm.1	NM_013685.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005411.mm.1	TC1800000741.mm.1	MTA TC