Assay Details

Gene Symbol: Cxcl12
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012477.2	NP_001012495.1	1 - 2	180		122
	NM_013655.4	NP_038683.1	1 - 2	180		122
	NM_021704.3	NP_068350.1	1 - 2	180		122
GenBank mRNA	AK045092.1	-	1 - 2	139		122
	AK075596.1	-	1 - 2	139		122
	AK157553.1	-	1 - 2	141		122
	BB610070.1	-	1 - 2	136		122
	BB840704.1	-	1 - 2	139		122
	BC006640.1	-	1 - 2	128	3483088	122
	BC020297.1	-	1 - 2	128		122
	BC029335.1	-	1 - 2	128		122
	BC046827.1	-	1 - 2	130		122
	D21072.1	-	1 - 2	117		122
	D43804.1	-	1 - 2	137		122
	D43805.1	-	1 - 2	137		122
	L12029.1	-	1 - 2	140		122
	L12030.1	-	1 - 2	135		122
	S74318.1	-	1 - 2	125		122

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600001313.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK045092.1,AK075596.1,AK157553.1,BC006640.1,D21072.1,D43804.1,D43805.1,L12029.1,L12030.1,NM_001012477.2,NM_013655.4,NM_021704.3,S74318.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Mus musculus

Mouse Chemokine Panel

Mouse Tumor Metastasis Panel

1700

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cxcl12

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600010389.mm.1	TC0600001313.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600010389.mm.1	NM_001012477.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010389.mm.1	NM_001012477.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010389.mm.1	NM_013655.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010389.mm.1	NM_013655.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010389.mm.1	NM_021704.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010389.mm.1	NM_021704.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010388.mm.1	TC0600001313.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600010388.mm.1	NM_001012477.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010388.mm.1	NM_001012477.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010388.mm.1	NM_013655.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010388.mm.1	NM_013655.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010388.mm.1	NM_021704.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010388.mm.1	NM_021704.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010385.mm.1	TC0600001313.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600010385.mm.1	NM_001012477.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010385.mm.1	NM_001012477.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010385.mm.1	NM_013655.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010385.mm.1	NM_013655.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010385.mm.1	NM_021704.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600010385.mm.1	NM_021704.3	Refseq

Citations (1)

Pro-inflammatory properties of stromal cell-derived factor-1 (CXCL12) in collagen-induced arthritis.

Authors: De Klerck B, Geboes L, Hatse S, Kelchtermans H, Meyvis Y, Vermeire K, Bridger G, Billiau A, Schols D, Matthys P
Journal: Arthritis Res Ther - Page No R1208 (Sat Jan 01 00:00:00 EST 2005)
Volume (Year): 7 (2005)
Product Usage: -

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Genomic Map