Mm00447180_m1

Gene Symbol:

Ppargc1a Asic2

Gene Name:

peroxisome proliferative activated receptor, gamma, coactivator 1 alpha

acid-sensing (proton-gated) ion channel 2

Gene Aliases:

A830037N07Rik, ENSMUSG00000079510, Gm11133, PGC-1, PGC-1v, Pgc-1alpha, Pgc1, Pgco1, Ppargc1

ACIC2, Accn1, BNC1, BNaC1, BNaC1a, Mdeg

Chromosome Location:

Chr.5: 51454249 - 52115958 on Build GRCm38

Chromosome Location:

Chr.11: 80880163 - 81968396 on Build GRCm38

Species:

Mouse

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Ppargc1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_008904.2	NP_032930.1	2 - 3	365		92
	NR_027710.1		2 - 3	365		92
GenBank mRNA	AB061324.1	-	2 - 3	288		92
	AF049330.1	-	2 - 3	317		92
	AK138668.1	-	2 - 3	366		92
	AK143753.1	-	2 - 3	317		92
	BC066868.1	-	2 - 3	260	30094033	92
	JX866946.1	-	2 - 3	253		92
	JX866947.1	-	2 - 3	323		92
	JX866948.1	-	2 - 3	253		92

Gene Symbol: Asic2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	EF410098.1	-		432		92

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500002394.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ppargc1a
Click here to find siRNAs for Gene Asic2

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Process(es)

response to dietary excess
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
mitochondrion organization
positive regulation of mitochondrion organization
response to muscle activity
negative regulation of smooth muscle cell migration
respiratory electron transport chain
positive regulation of cellular metabolic process
circadian regulation of gene expression
cellular response to oxidative stress
regulation of circadian rhythm
negative regulation of neuron apoptotic process
cellular respiration
negative regulation of glycolytic process
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of fatty acid oxidation
rhythmic process
positive regulation of smooth muscle cell proliferation
positive regulation of sequence-specific DNA binding transcription factor activity
negative regulation of neuron death
positive regulation of cellular respiration
positive regulation of mitochondrial DNA metabolic process
positive regulation of muscle tissue development
negative regulation of receptor activity
regulation of N-methyl-D-aspartate selective glutamate receptor activity
positive regulation of energy homeostasis
positive regulation of ATP biosynthetic process

Function(s)

nucleotide binding
RNA polymerase II transcription cofactor activity
nucleic acid binding
DNA binding
chromatin binding
transcription coactivator activity
RNA binding
protein binding
transcription factor binding
ligand-dependent nuclear receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
chromatin DNA binding
ubiquitin protein ligase binding
sequence-specific DNA binding