Mm00447780_m1

• Gene Symbol: Sparcl1
• Gene Name: SPARC-like 1
• Gene Aliases: Ecm2, Sc1, hevin, mast9
• Chromosome Location: Chr.5: 104079108 - 104114088 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sparcl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010097.4	NP_034227.3	1 - 2	712		78
GenBank mRNA	AK134608.1	-	1 - 2	353		78
	AK158725.1	-	1 - 2	219		78
	BC003759.1	-	1 - 2	357	3486162	78
	U64827.1	-	1 - 2	310		78
	U77330.1	-	1 - 2	377		78

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500002887.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK134608.1,AK158725.1,BC003759.1,NM_010097.4,U64827.1,U77330.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sparcl1

Panther Classification:

Molecular Function -

extracellular matrix glycoprotein

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0500025503.mm.1	TC0500002887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500025503.mm.1	NM_010097.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500025503.mm.1	NM_010097.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0500025505.mm.1	TC0500002887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500025505.mm.1	NM_010097.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500025505.mm.1	NM_010097.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0500025504.mm.1	TC0500002887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500025504.mm.1	NM_010097.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500025504.mm.1	NM_010097.4	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	922922	-	-