Mm00450226_m1

• Gene Symbol: Scarb1
• Gene Name: scavenger receptor class B, member 1
• Gene Aliases: AI120173, CD36, Cd36l1, Cla-1, Cla1, D5Ertd460e, Hdlq1, Hlb398, SR-B1, SR-BI, SRBI, Srb1, mSR-BI
• Chromosome Location: Chr.5: 125277087 - 125341111 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Scarb1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001205082.1	NP_001192011.1	1 - 2	333		56
	NM_001205083.1	NP_001192012.1	1 - 2	333		56
	NM_016741.2	NP_058021.1	1 - 2	333		56
GenBank mRNA	AK010622.1	-	1 - 2	258		56
	AK028191.1	-	1 - 2	314		56
	AK033114.1	-	1 - 2	258		56
	AK145588.1	-	1 - 2	259		56
	AK154933.1	-	1 - 2	325		56
	AK158122.1	-	1 - 2	258		56
	AK169906.1	-	1 - 2	309		56
	AK171602.1	-	1 - 2	312		56
	BC004656.1	-	1 - 2	313	3498018	56
	CT010222.1	-	1 - 2	121		56
	U37799.1	-	1 - 2	171		56

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500003271.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Apoptosis, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Scarb1

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

endothelial cell proliferation
pattern recognition receptor signaling pathway
androgen biosynthetic process
cholesterol catabolic process
lipid transport
receptor-mediated endocytosis
phagocytosis, recognition
cell adhesion
positive regulation of triglyceride biosynthetic process
positive regulation of cholesterol storage
regulation of phosphatidylcholine catabolic process
phospholipid transport
lipopolysaccharide transport
cholesterol transport
lipopolysaccharide-mediated signaling pathway
detection of lipopolysaccharide
cholesterol efflux
high-density lipoprotein particle remodeling
low-density lipoprotein particle clearance
high-density lipoprotein particle clearance
vitamin transmembrane transport
cholesterol homeostasis
blood vessel endothelial cell migration
recognition of apoptotic cell
reverse cholesterol transport
adhesion of symbiont to host
regulation of phagocytosis
positive regulation of nitric-oxide synthase activity
triglyceride homeostasis
cholesterol import

Function(s)

lipopolysaccharide binding
phosphatidylserine binding
lipopolysaccharide receptor activity
high-density lipoprotein particle binding
low-density lipoprotein particle binding
apolipoprotein binding
apolipoprotein A-I binding
protein homodimerization activity
high-density lipoprotein particle receptor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0500029618.mm.1	TC0500003271.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500029618.mm.1	NM_001205082.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029618.mm.1	NM_001205082.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029618.mm.1	NM_001205083.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029618.mm.1	NM_001205083.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029618.mm.1	NM_016741.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029618.mm.1	NM_016741.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029607.mm.1	TC0500003271.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500029607.mm.1	NM_001205082.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029607.mm.1	NM_001205082.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029607.mm.1	NM_001205083.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029607.mm.1	NM_001205083.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029607.mm.1	NM_016741.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029607.mm.1	NM_016741.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029610.mm.1	TC0500003271.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500029610.mm.1	NM_001205082.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029610.mm.1	NM_001205082.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029610.mm.1	NM_001205083.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029610.mm.1	NM_001205083.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029610.mm.1	NM_016741.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029610.mm.1	NM_016741.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029617.mm.1	TC0500003271.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500029617.mm.1	NM_001205082.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029617.mm.1	NM_001205082.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029617.mm.1	NM_001205083.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029617.mm.1	NM_001205083.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029617.mm.1	NM_016741.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029617.mm.1	NM_016741.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029609.mm.1	TC0500003271.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500029609.mm.1	NM_001205082.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029609.mm.1	NM_001205082.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029609.mm.1	NM_001205083.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029609.mm.1	NM_001205083.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029609.mm.1	NM_016741.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500029609.mm.1	NM_016741.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	856472	-	-