Mm00453115_g1

• Gene Symbol: Upf1
• Gene Name: UPF1 regulator of nonsense transcripts homolog (yeast)
• Gene Aliases: B430202H16Rik, NORF1, PNORF-1, Rent1, Upflp
• Chromosome Location: Chr.8: 70331522 - 70353999 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Upf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001122829.1	NP_001116301.1	21 - 22	3318		77
	NM_030680.2	NP_109605.2	21 - 22	3285		77
GenBank mRNA	AF182947.1	-	22 - 23			77
	AF322655.1	-	21 - 22	3005		77
	AK052517.1	-	10 - 11	1353		77
	AK148196.1	-	22 - 23	3295		77
	BC030916.1	-	9 - 10	1296		77
	BC052149.1	-	21 - 22	3223	6332288	77
	BC056442.1	-	21 - 22	3318	5702493	77

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800002390.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Upf1

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
nuclear-transcribed mRNA catabolic process
DNA replication
DNA repair
regulation of translational termination
dosage compensation by inactivation of X chromosome
histone mRNA catabolic process

Function(s)

nucleotide binding
DNA binding
chromatin binding
RNA binding
ATP-dependent RNA helicase activity
helicase activity
ATP binding
zinc ion binding
hydrolase activity
poly(A) RNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0800018069.mm.1	NM_001122829.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0800018069.mm.1	NM_030680.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800018069.mm.1	TC0800002390.mm.1	MTA TC