Mm00458316_g1

• Gene Symbol: Sfpq
• Gene Name: splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
• Gene Aliases: 1110004P21Rik, 2810416M14Rik, 5730453G22Rik, 9030402K04Rik, AU021830, D4Ertd314e, Gm12940, OTTMUSG00000009329, PSF, REP1
• Chromosome Location: Chr.4: 127020560 - 127037016 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sfpq
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_023603.3	NP_076092.1	6 - 7	1791		68
	NR_045010.1		6 - 7	1791		68
GenBank mRNA	AK018483.1	-	1 - 2	84		68
	AY034062.1	-	6 - 7	1706		68
	BC037486.1	-	4 - 5	504		68
	BC049227.1	-	3 - 4	362		68
	BC055468.1	-	2 - 3	149		68
	BC080848.1	-	6 - 7	1757		68
	BC089305.1	-	6 - 7	1757	30360144	68
	CA319647.1	-	4 - 5	422		68

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400001477.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sfpq

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
alternative mRNA splicing, via spliceosome
double-strand break repair via homologous recombination
DNA repair
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA processing
cellular response to DNA damage stimulus
RNA splicing
regulation of circadian rhythm
negative regulation of circadian rhythm
positive regulation of sister chromatid cohesion
negative regulation of transcription, DNA-templated
rhythmic process
chromosome organization
regulation of cell cycle
histone H3 deacetylation
positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway

Function(s)

nucleotide binding
transcription regulatory region sequence-specific DNA binding
core promoter binding
nucleic acid binding
DNA binding
RNA binding
protein binding
histone deacetylase binding
transcription regulatory region DNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400011278.mm.1	NM_023603.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400011278.mm.1	NM_023603.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0400011278.mm.1	NR_045010.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400011278.mm.1	NR_045010.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400011278.mm.1	TC0400001477.mm.1	MTA TC