Mm00459721_g1

• Gene Symbol: Rbfox2
• Gene Name: RNA binding protein, fox-1 homolog (C. elegans) 2
• Gene Aliases: Fbm2, Fxh, Hrnbp2, Rbm9
• Chromosome Location: Chr.15: 77078990 - 77307053 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rbfox2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001110827.2	NP_001104297.1	12 - 13	1737		67
	NM_001110828.2	NP_001104298.1	11 - 12	1291		67
	NM_001110829.2	NP_001104299.1	11 - 12	1282		67
	NM_001110830.2	NP_001104300.1	11 - 12	1279		67
	NM_001286417.1	NP_001273346.1	10 - 11	1239		67
	NM_001286418.1	NP_001273347.1	8 - 9	997		67
	NM_001286419.1	NP_001273348.1	10 - 11	1186		67
	NM_053104.6	NP_444334.3	12 - 13	1749		67
	NM_175387.3	NP_780596.1	11 - 12	1697		67
GenBank mRNA	AF229055.1	-	11 - 12	1222		67
	AF387322.1	-	11 - 12	1023		67
	AK044929.1	-	10 - 11	1214		67
	AK077594.1	-	12 - 13	1625		67
	AK139555.1	-	13 - 14	1721		67
	AY659951.1	-	11 - 12	1023		67
	AY659952.1	-	11 - 12	1026		67
	AY659953.1	-	8 - 9	741		67
	AY904025.1	-	13 - 14	1173		67
	BC002124.1	-	11 - 12	1117	3494630	67
	BC027263.1	-	11 - 12	1249	3661748	67
	DQ017388.1	-	11 - 12	1035		67
	DQ017389.1	-	10 - 11	930		67

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500001799.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rbfox2

Panther Classification:

Molecular Function -

RNA metabolism protein, RNA processing factor, RNA splicing factor, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

regulation of alternative mRNA splicing, via spliceosome
mRNA processing
RNA splicing
regulation of definitive erythrocyte differentiation
radial glia guided migration of Purkinje cell
intracellular estrogen receptor signaling pathway
regulation of RNA splicing
negative regulation of transcription, DNA-templated
dendrite morphogenesis
neuromuscular process controlling balance

Function(s)

nucleotide binding
nucleic acid binding
transcription corepressor activity
RNA binding
mRNA binding
protein binding
transcription factor binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_001110827.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_001110828.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_001110829.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_001110830.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_001286417.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_001286418.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_001286419.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_053104.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_175387.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	NM_175387.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013987.mm.1	TC1500001799.mm.1	MTA TC