Mm00470378_m1

• Gene Symbol: Aplf
• Gene Name: aprataxin and PNKP like factor
• Gene Aliases: 2010301N04Rik, AI452191
• Chromosome Location: Chr.6: 87628429 - 87672168 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Aplf
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001170489.1	NP_001163960.1	8 - 9	1487		72
	NM_024251.4	NP_077213.2	8 - 9	1357		72
GenBank mRNA	AK008513.1	-	8 - 9	1488		72
	AK034191.1	-	8 - 9	1337		72
	BC002179.1	-	8 - 9	1135	3487226	72

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600002658.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Aplf

Gene Ontology Categories:

Process(es)

single strand break repair
DNA repair
double-strand break repair
cellular response to DNA damage stimulus
regulation of isotype switching
positive regulation of DNA ligation
nucleic acid phosphodiester bond hydrolysis

Function(s)

nucleotide binding
DNA-(apurinic or apyrimidinic site) lyase activity
endodeoxyribonuclease activity
3'-5' exonuclease activity
lyase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600020667.mm.1	TC0600002658.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600020667.mm.1	NM_001170489.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020667.mm.1	NM_001170489.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020667.mm.1	NM_024251.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020667.mm.1	NM_024251.4	Refseq