Mm00472175_m1 Best Coverage

• Gene Symbol: Ddb2
• Gene Name: damage specific DNA binding protein 2
• Gene Aliases: 2610043A19Rik
• Chromosome Location: Chr.2: 91211579 - 91237132 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ddb2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_028119.5	NP_082395.2	1 - 2	374		64
GenBank mRNA	AK011756.1	-	1 - 2	217		64
	AK158770.1	-	1 - 2	254		64
	AY027937.1	-	1 - 2	292		64
	BC028955.1	-	1 - 2	43		64
	BC080821.1	-	1 - 2	195		64
	BC099410.1	-	1 - 2	141	30933658	64
	CK627126.1	-	1 - 2	374		64

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200004111.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ddb2

Panther Classification:

Molecular Function -

DNA metabolism protein, damaged DNA-binding protein, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

protein polyubiquitination
DNA repair
pyrimidine dimer repair
cellular response to DNA damage stimulus
response to UV
histone H2A monoubiquitination
protein autoubiquitination
UV-damage excision repair

Function(s)

DNA binding
damaged DNA binding
ubiquitin-protein transferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200034447.mm.1	NM_028119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034447.mm.1	NM_028119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034447.mm.1	TC0200004111.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200034444.mm.1	NM_028119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034444.mm.1	NM_028119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034444.mm.1	TC0200004111.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200034446.mm.1	NM_028119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034446.mm.1	NM_028119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034446.mm.1	TC0200004111.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200034449.mm.1	NM_028119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034449.mm.1	NM_028119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034449.mm.1	TC0200004111.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200034451.mm.1	NM_028119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034451.mm.1	NM_028119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0200034451.mm.1	TC0200004111.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	432244	-	-