Mm00473099_m1

• Gene Symbol: Sf3b1
• Gene Name: splicing factor 3b, subunit 1
• Gene Aliases: 155kDa, 2810001M05Rik, AA409119, Prp10, SAP155, SF3b155, TA-8, Targ4
• Chromosome Location: Chr.1: 54985169 - 55027500 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sf3b1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031179.2	NP_112456.2	1 - 2	135		70
GenBank mRNA	AB037890.1	-	1 - 2	160		70
	AK012632.1	-	1 - 2	94		70
	AK140982.1	-	1 - 2	53		70
	AK146989.1	-	1 - 2	44		70
	AK165992.1	-	1 - 2	139		70
	AK171454.1	-	1 - 2	53		70
	BC003419.1	-	1 - 2	38		70
	BC028959.1	-	1 - 2	38		70
	BC037098.1	-	1 - 2	122		70
	BC058563.1	-	1 - 2	38		70
	BC080754.1	-	1 - 2	54		70
	CK331410.1	-	1 - 2	135		70

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100002353.mm.1

Additional Information:

This assay is in the 5'UTR region of the AB037890.1,AK012632.1,AK140982.1,AK171454.1,BC003419.1,BC028959.1,NM_031179.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sf3b1

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

RNA splicing, via transesterification reactions
mRNA splicing, via spliceosome
blastocyst formation
mRNA processing
RNA splicing
anterior/posterior pattern specification

Function(s)

chromatin binding
protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100019111.mm.1	NM_031179.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100019111.mm.1	NM_031179.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0100019111.mm.1	TC0100002353.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100019110.mm.1	NM_031179.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100019110.mm.1	NM_031179.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0100019110.mm.1	TC0100002353.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	432182	-	-