Mm00474164_g1

• Gene Symbol: Smarca1
• Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
• Gene Aliases: 5730494M04Rik, Snf2l
• Chromosome Location: Chr.X: 47809370 - 47892931 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smarca1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001290708.1	NP_001277637.1	21 - 22	2948		82
	NM_053123.4	NP_444353.3	21 - 22	2948		82
GenBank mRNA	AF325920.1	-	21 - 22	2958		82
	AK030741.1	-	21 - 22	2915		82
	BC016071.1	-	21 - 22	2925		82
	BC057115.1	-	21 - 22	2948	6406330	82

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00002154.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smarca1

Panther Classification:

Molecular Function -

DNA helicase

Gene Ontology Categories:

Process(es)

DNA strand renaturation
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
brain development
chromatin modification
neuron differentiation
ATP-dependent chromatin remodeling
positive regulation of transcription, DNA-templated
regulation of neural precursor cell proliferation

Function(s)

nucleotide binding
nucleic acid binding
DNA binding
chromatin binding
helicase activity
ATP binding
DNA-dependent ATPase activity
hydrolase activity
hydrolase activity, acting on acid anhydrides
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
ATPase activity
nucleosome binding
annealing helicase activity
nucleosome-dependent ATPase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00013594.mm.1	NM_053123.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00013594.mm.1	NM_053123.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00013594.mm.1	TC0X00002154.mm.1	MTA TC