Mm00476679_m1 Best Coverage

• Gene Symbol: Pde6b
• Gene Name: phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
• Gene Aliases: Pdeb, r, rd, rd-1, rd1, rd10
• Chromosome Location: Chr.5: 108388373 - 108431743 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pde6b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_008806.2	NP_032832.2	12 - 13	1683		74
GenBank mRNA	AK039397.1	-	12 - 13	1395		74
	AK044364.1	-	12 - 13	1626		74
	BC048247.1	-	12 - 13	1662		74
	BC058803.1	-	11 - 12	2343		74
	BC129923.1	-	12 - 13	1613	40111882	74
	BC129924.1	-	12 - 13	1612		74
	X55968.1	-	12 - 13	1616		74
	X60133.1	-	12 - 13	1623		74
	X87952.1	-	12 - 13	1623		74

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500001103.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pde6b

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Process(es)

signal transduction
visual perception
detection of light stimulus
GMP metabolic process
response to stimulus
regulation of cytosolic calcium ion concentration
retina development in camera-type eye

Function(s)

3',5'-cyclic-nucleotide phosphodiesterase activity
phosphoric diester hydrolase activity
hydrolase activity
metal ion binding
3',5'-cyclic-GMP phosphodiesterase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0500009391.mm.1	TC0500001103.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500009391.mm.1	NM_008806.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500009391.mm.1	NM_008806.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	912710	-	-