Mm00477266_m1 Best Coverage

• Gene Symbol: Ptrf
• Gene Name: polymerase I and transcript release factor
• Gene Aliases: 2310075E07Rik, AW546441, Cav-p60, Cavin
• Chromosome Location: Chr.11: 100956736 - 100971027 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptrf
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_008986.2	NP_033012.1	1 - 2	623		53
GenBank mRNA	AF036249.1	-	1 - 2	578		53
	BC110698.1	-	1 - 2	605	30608521	53
	BC116701.1	-	1 - 2	565	40104877	53
	BC117527.1	-	1 - 2	565	40104876	53

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100003791.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ptrf

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
DNA-templated transcription, termination
regulation of transcription, DNA-templated
transcription initiation from RNA polymerase I promoter
termination of RNA polymerase I transcription

Function(s)

RNA binding
rRNA binding
rRNA primary transcript binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100035010.mm.1	NM_008986.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035010.mm.1	NM_008986.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035010.mm.1	TC1100003791.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100035006.mm.1	NM_008986.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035006.mm.1	NM_008986.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035006.mm.1	TC1100003791.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100035007.mm.1	NM_008986.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035007.mm.1	NM_008986.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035007.mm.1	TC1100003791.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100035012.mm.1	NM_008986.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035012.mm.1	NM_008986.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100035012.mm.1	TC1100003791.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	446555	-	-