Mm00477817_m1

• Gene Symbol: Nfya
• Gene Name: nuclear transcription factor-Y alpha
• Gene Aliases: AA407810, Cbf-b, SEZ-10, SEZ10
• Chromosome Location: Chr.17: 48386885 - 48409901 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nfya
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001110832.1	NP_001104302.1	6 - 7	816		67
	NM_010913.2	NP_035043.1	5 - 6	729		67
GenBank mRNA	AK004729.1	-	6 - 7	762		67
	AK143723.1	-	5 - 6	691		67
	AK156487.1	-	6 - 7	646		67
	BC029695.1	-	5 - 6	617	5374597	67
	BC057099.1	-	6 - 7	718	5716111	67
	M86215.1	-	5 - 6	550		67
	X55315.1	-	5 - 6	639		67

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700002225.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nfya

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
rhythmic process
regulation of stem cell population maintenance
positive regulation of stem cell proliferation

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcription cofactor binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
transcription regulatory region DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700021022.mm.1	NM_001110832.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021022.mm.1	NM_001110832.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021022.mm.1	NM_010913.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021022.mm.1	NM_010913.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021022.mm.1	TC1700002225.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700021026.mm.1	NM_001110832.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021026.mm.1	NM_001110832.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021026.mm.1	NM_010913.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021026.mm.1	NM_010913.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700021026.mm.1	TC1700002225.mm.1	MTA TC