Mm00479441_m1

• Gene Symbol: Nfatc1
• Gene Name: nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
• Gene Aliases: 2210017P03Rik, AI449492, AV076380, NF-ATc, NFAT2, NFATc, Nfatcb
• Chromosome Location: Chr.18: 80606205 - 80713071 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nfatc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001164109.1	NP_001157581.1	3 - 4	1694		118
	NM_001164110.1	NP_001157582.1	3 - 4	1694		118
	NM_001164111.1	NP_001157583.1	3 - 4	1402		118
	NM_001164112.1	NP_001157584.1	3 - 4	1402		118
	NM_016791.4	NP_058071.2	3 - 4	1402		118
	NM_198429.2	NP_940821.1	3 - 4	1694		118
GenBank mRNA	AF049606.1	-	3 - 4	1355		118
	AF087434.1	-	3 - 4	1389		118
	AF239169.1	-	3 - 4	1392		118
	AK004810.1	-	3 - 4	1360		118
	AK048610.1	-	3 - 4	1696		118
	AK144965.1	-	3 - 4	1695		118
	BC061509.1	-	3 - 4	1681	5354603	118
	EU887567.1	-	3 - 4	1389		118
	EU887568.1	-	3 - 4	1389		118
	EU887569.1	-	3 - 4	1347		118
	EU887570.1	-	3 - 4	1389		118
	EU887571.1	-	3 - 4	1347		118
	EU887572.1	-	3 - 4	1347		118

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800001665.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nfatc1

Gene Ontology Categories:

Process(es)

G1/S transition of mitotic cell cycle
negative regulation of transcription by RNA polymerase II
epithelial to mesenchymal transition
lymphangiogenesis
B-1a B cell differentiation
heart valve morphogenesis
aortic valve morphogenesis
pulmonary valve morphogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
calcium ion transport
heart development
positive regulation of gene expression
transition between fast and slow fiber
osteoclast differentiation
calcineurin-NFAT signaling cascade
intracellular signal transduction
regulation of hair cycle
cell quiescence
negative regulation of osteoblast differentiation
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
ventricular septum morphogenesis
branching involved in lymph vessel morphogenesis
heart trabecula morphogenesis
negative regulation of stem cell proliferation

Function(s)

transcription cis-regulatory region binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
transcription coactivator binding
DNA-binding transcription repressor activity, RNA polymerase II-specific
DNA binding
chromatin binding
DNA-binding transcription factor activity
protein binding
transcription factor binding
sequence-specific DNA binding
mitogen-activated protein kinase p38 binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	TC1800001665.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164109.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164109.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164110.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164110.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164111.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164111.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164112.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_001164112.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_016791.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_016791.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_198429.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800011921.mm.1	NM_198429.2	Refseq