Mm00480671_g1

• Gene Symbol: Pnkp
• Gene Name: polynucleotide kinase 3'- phosphatase
• Gene Aliases: 1810009G08Rik, PNK
• Chromosome Location: Chr.7: 44857055 - 44862929 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pnkp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001290764.1	NP_001277693.1	11 - 12	1198		81
	NM_001290766.1	NP_001277695.1	9 - 10	1182		81
	NM_001290767.1	NP_001277696.1	9 - 10	953		81
	NM_021549.3	NP_067524.2	10 - 11	1290		81
GenBank mRNA	AF129451.1	-	9 - 10	948		81
	AK049992.1	-	10 - 11	1093		81
	AK160160.1	-	11 - 12	1195		81
	AK172558.1	-	9 - 10	987		81
	BC047269.1	-	8 - 9	1232		81
	BC057659.1	-	10 - 11	1092	2865792	81

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700000820.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pnkp

Gene Ontology Categories:

Process(es)

DNA repair
cellular response to DNA damage stimulus
response to oxidative stress
metabolic process
phosphorylation
dephosphorylation
DNA damage response, detection of DNA damage
nucleotide phosphorylation
DNA 3' dephosphorylation involved in DNA repair
polynucleotide 3' dephosphorylation

Function(s)

nucleotide binding
double-stranded DNA binding
catalytic activity
ATP binding
kinase activity
transferase activity
hydrolase activity
nucleotide kinase activity
polynucleotide 3'-phosphatase activity
ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700006901.mm.1	TC0700000820.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700006901.mm.1	NM_021549.3	Refseq