Mm00480952_m1

• Gene Symbol: Chtop
• Gene Name: chromatin target of PRMT1
• Gene Aliases: 2500003M10Rik, Fop, Srag
• Chromosome Location: Chr.3: 90498539 - 90509888 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chtop
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001293776.1	NP_001280705.1	1 - 2	308		118
	NM_001293777.1	NP_001280706.1	1 - 2	308		118
	NM_001293778.1	NP_001280707.1	1 - 2	308		118
	NM_001293779.1	NP_001280708.1	1 - 2	308		118
	NM_001293780.1	NP_001280709.1	1 - 2	308		118
	NM_001293781.1	NP_001280710.1	1 - 2	308		118
	NM_001293782.1	NP_001280711.1	1 - 2	308		118
	NM_023215.6	NP_075704.2	1 - 2	308		118
GenBank mRNA	AB041654.1	-	1 - 2	260		118
	AK004558.2	-	1 - 2	254		118
	AK005377.1	-	1 - 2	273		118
	AK010866.1	-	1 - 2	290		118
	AK047914.1	-	1 - 2	282		118
	AK077960.1	-	1 - 2	297		118
	AK132769.1	-	1 - 2	281		118
	AK135914.1	-	1 - 2	285		118
	AK152492.1	-	1 - 2	261		118
	BC051939.1	-	1 - 2	262		118
	BC066837.1	-	1 - 2	261		118
	BQ746440.1	-	1 - 2	262		118
	CX234428.1	-	1 - 2	151		118

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002373.mm.1

Additional Information:

This assay is in the 5'UTR region of the AB041654.1,AK004558.2,AK005377.1,AK010866.1,AK047914.1,AK077960.1,AK132769.1,AK152492.1,NM_001293776.1,NM_001293777.1,NM_001293778.1,NM_001293779.1,NM_001293780.1,NM_001293781.1,NM_001293782.1,NM_023215.6 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chtop

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

RNA binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300018495.mm.1	NM_023215.6	Refseq
Affymetrix Mouse Clariom S Array	PSR0300018495.mm.1	TC0300002373.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300018498.mm.1	NM_023215.6	Refseq
Affymetrix Mouse Clariom S Array	PSR0300018498.mm.1	TC0300002373.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300018493.mm.1	NM_023215.6	Refseq
Affymetrix Mouse Clariom S Array	PSR0300018493.mm.1	TC0300002373.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300018496.mm.1	NM_023215.6	Refseq
Affymetrix Mouse Clariom S Array	PSR0300018496.mm.1	TC0300002373.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300018494.mm.1	NM_023215.6	Refseq
Affymetrix Mouse Clariom S Array	PSR0300018494.mm.1	TC0300002373.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	600552	-	-