Mm00482991_g1

• Gene Symbol: Capn3
• Gene Name: calpain 3
• Gene Aliases: AI323605, Capa-3, Capa3, Lp82, p94
• Chromosome Location: Chr.2: 120463593 - 120504919 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Capn3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001109761.2	NP_001103231.1	15 - 16	1790		67
	NM_001177799.1	NP_001171270.1	15 - 16	2057		67
	NM_007601.3	NP_031627.2	18 - 19	2333		67
GenBank mRNA	AF091998.1	-	15 - 16	1754		67
	AF127766.2	-	15 - 16	1777		67
	AK049994.1	-	5 - 6	219		67
	AK088613.1	-	3 - 4	544		67
	BC090661.1	-	15 - 16	1790	30681055	67
	BC139790.1	-	18 - 19	2053	40047690	67
	X92523.1	-	18 - 19	2053		67

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200005480.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Protease, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Capn3

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

autolysis
protein complex assembly
proteolysis
positive regulation of satellite cell activation involved in skeletal muscle regeneration
response to muscle activity
myofibril assembly
negative regulation of protein sumoylation
negative regulation of apoptotic process
regulation of I-kappaB kinase/NF-kappaB signaling
sarcomere organization
regulation of myoblast differentiation
positive regulation of proteolysis
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
regulation of catalytic activity
positive regulation of NF-kappaB transcription factor activity
positive regulation of release of sequestered calcium ion into cytosol
response to calcium ion
muscle structure development
G1 to G0 transition involved in cell differentiation
cellular response to calcium ion
cellular response to salt stress
protein localization to membrane
self proteolysis
sodium-dependent self proteolysis

Function(s)

catalytic activity
calcium-dependent cysteine-type endopeptidase activity
receptor binding
calcium ion binding
protein binding
peptidase activity
cysteine-type peptidase activity
structural constituent of muscle
hydrolase activity
enzyme binding
sodium ion binding
titin binding
protein complex scaffold
metal ion binding
ligase regulator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200013714.mm.1	NM_001109761.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013714.mm.1	NM_001109761.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013714.mm.1	NM_001177799.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013714.mm.1	NM_001177799.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013714.mm.1	NM_007601.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013714.mm.1	NM_007601.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200013714.mm.1	TC0200005480.mm.1	MTA TC