Mm00486756_m1

• Gene Symbol: Ctnna1
• Gene Name: catenin (cadherin associated protein), alpha 1
• Gene Aliases: 2010010M04Rik, AA517462, AI988031, Catna1
• Chromosome Location: Chr.18: 35118912 - 35254775 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctnna1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009818.1	NP_033948.1	14 - 15	2083		96
GenBank mRNA	AK004623.1	-	14 - 15	2041		96
	AK036752.1	-	14 - 15	2108		96
	AK046513.1	-	8 - 9	1442		96
	AK148496.1	-	14 - 15	2080		96
	AK149721.1	-	14 - 15	2098		96
	AK149738.1	-	14 - 15	2098		96
	AK159339.1	-	14 - 15	2098		96
	AK168635.1	-	14 - 15	2108		96
	BC048163.1	-	14 - 15	2071	6418358	96
	BC060174.1	-	14 - 15	2078		96
	BC068316.1	-	14 - 15	2075	30106659	96
	BC105576.1	-	14 - 15	2063	3967124	96
	D90362.1	-	14 - 15	2074		96
	X59990.1	-	14 - 15	2083		96

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800000306.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctnna1

Panther Classification:

Molecular Function -

non-motor actin binding protein

Gene Ontology Categories:

Process(es)

actin filament organization
cell adhesion
establishment or maintenance of cell polarity
negative regulation of neuroblast proliferation
gap junction assembly
cellular protein localization
regulation of cell proliferation
negative regulation of apoptotic process
apical junction assembly
positive regulation of smoothened signaling pathway
protein heterooligomerization
cellular response to indole-3-methanol
epithelial cell-cell adhesion
negative regulation of cell motility
negative regulation of integrin-mediated signaling pathway
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Function(s)

structural molecule activity
protein binding
beta-catenin binding
vinculin binding
poly(A) RNA binding
gamma-catenin binding
cadherin binding
actin filament binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1800002250.mm.1	NM_009818.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800002250.mm.1	NM_009818.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800002250.mm.1	TC1800000306.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800002252.mm.1	NM_009818.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800002252.mm.1	NM_009818.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800002252.mm.1	TC1800000306.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800002251.mm.1	NM_009818.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800002251.mm.1	NM_009818.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800002251.mm.1	TC1800000306.mm.1	MTA TC