Mm00488065_m1

• Gene Symbol: Rpgr
• Gene Name: retinitis pigmentosa GTPase regulator
• Gene Aliases: Rp3h
• Chromosome Location: Chr.X: 10158216 - 10216795 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rpgr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001177950.1	NP_001171421.1	16 - 17	2920		94
	NM_001177951.1	NP_001171422.1	16 - 17	2920		94
	NM_001177952.1	NP_001171423.1	15 - 16	2035		94
	NM_011285.2	NP_035415.1	15 - 16	2041		94
GenBank mRNA	AF044677.1	-	15 - 16	1959		94
	AJ238396.1	-	16 - 17	2832		94
	AK029864.1	-	16 - 17	3046		94
	AK136298.1	-	15 - 16	1972		94
	AK138977.1	-	15 - 16	2036		94
	BC012661.1	-	15 - 16	1980		94

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00003418.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rpgr

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

visual perception
cell projection organization
intraciliary transport
cilium assembly
eye photoreceptor cell development
response to stimulus
retina morphogenesis in camera-type eye
cellular response to light stimulus

Function(s)

guanyl-nucleotide exchange factor activity
protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00011777.mm.1	NM_001177951.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011777.mm.1	NM_001177951.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011777.mm.1	TC0X00003418.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_001177950.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_001177950.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_001177951.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_001177951.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_001177952.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_001177952.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_011285.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	NM_011285.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00011778.mm.1	TC0X00003418.mm.1	MTA TC