Mm00490089_m1

• Gene Symbol: Smarcal1
• Gene Name: SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
• Gene Aliases: 6030401P21Rik, AI851716, Mharp
• Chromosome Location: Chr.1: 72536687 - 72636790 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smarcal1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_018817.2	NP_061287.2	2 - 3	950		70
GenBank mRNA	AF088884.1	-	2 - 3	930		70
	AK035854.1	-	2 - 3	927		70
	AK042332.1	-	2 - 3	929		70
	AK077878.1	-	2 - 3	928		70
	AK083488.1	-	2 - 3	928		70
	AK146767.1	-	2 - 3	944		70
	AK154020.1	-	2 - 3	933		70
	AK161570.1	-	2 - 3	870		70
	AK169465.1	-	2 - 3	941		70
	BC029078.1	-	2 - 3	885	3992325	70

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100000608.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smarcal1

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

DNA strand renaturation
DNA metabolic process
DNA repair
regulation of transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
replication fork processing

Function(s)

nucleotide binding
DNA binding
helicase activity
ATP binding
DNA-dependent ATPase activity
hydrolase activity
annealing helicase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100004874.mm.1	NM_018817.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100004874.mm.1	NM_018817.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0100004874.mm.1	TC0100000608.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100004869.mm.1	TC0100000608.mm.1	MTA TC