Mm00490634_m1 Best Coverage

• Gene Symbol: Stub1
• Gene Name: STIP1 homology and U-Box containing protein 1
• Gene Aliases: 0610033N24Rik, 2210017D18Rik, 2310040B03Rik, AW046544, Chip
• Chromosome Location: Chr.17: 25830636 - 25833361 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Stub1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019719.3	NP_062693.1	1 - 2	673		94
GenBank mRNA	AF129086.1	-	1 - 2	220		94
	AK002752.1	-	1 - 2	230		94
	AK004464.1	-	1 - 2	221		94
	AK045776.1	-	1 - 2	222		94
	AK158595.1	-	1 - 2	257		94
	AK166630.1	-	1 - 2	239		94
	BC020110.1	-	1 - 2	215		94
	BC027427.1	-	1 - 2	673	4191866	94
	BC038939.1	-	1 - 2	262	2598940	94

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700001675.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Stub1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein polyubiquitination
DNA repair
protein folding
ubiquitin-dependent protein catabolic process
misfolded or incompletely synthesized protein catabolic process
cellular response to DNA damage stimulus
protein ubiquitination
ubiquitin-dependent SMAD protein catabolic process
endoplasmic reticulum unfolded protein response
positive regulation of protein ubiquitination
regulation of glucocorticoid metabolic process
negative regulation of protein binding
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
positive regulation of ubiquitin-protein transferase activity
protein maturation
protein autoubiquitination
protein K63-linked ubiquitination
cellular response to misfolded protein
positive regulation of chaperone-mediated protein complex assembly

Function(s)

G-protein coupled receptor binding
ubiquitin-protein transferase activity
protein binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
enzyme binding
kinase binding
Hsp70 protein binding
protein binding, bridging
TPR domain binding
heat shock protein binding
ubiquitin protein ligase binding
ubiquitin-ubiquitin ligase activity
protein homodimerization activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
SMAD binding
misfolded protein binding
Hsp90 protein binding
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700015341.mm.1	NM_019719.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700015341.mm.1	NM_019719.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1700015341.mm.1	TC1700001675.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700015342.mm.1	NM_019719.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700015342.mm.1	NM_019719.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1700015342.mm.1	TC1700001675.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700015340.mm.1	NM_019719.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700015340.mm.1	NM_019719.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1700015340.mm.1	TC1700001675.mm.1	MTA TC