Mm00492258_g1

• Gene Symbol: Atn1
• Gene Name: atrophin 1
• Gene Aliases: Atr1, Drpla, atrophin-1
• Chromosome Location: Chr.6: 124742544 - 124756487 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atn1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_007881.4	NP_031907.2	6 - 7	2817		94
GenBank mRNA	BC050920.1	-	6 - 7	2817	6406687	94
	BC053051.1	-	6 - 7	2645	5706586	94
	D87744.1	-	5 - 6	2527		94

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600003604.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atn1

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
toxin metabolic process
cell migration
maintenance of cell polarity
positive regulation of transcription from RNA polymerase II promoter
neuron apoptotic process
negative regulation of nucleic acid-templated transcription

Function(s)

RNA polymerase II transcription coactivator activity
transcription corepressor activity
protein binding
JUN kinase binding
protein domain specific binding
toxin receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600024136.mm.1	TC0600003604.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600024136.mm.1	NM_007881.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600024136.mm.1	NM_007881.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0600024135.mm.1	TC0600003604.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600024135.mm.1	NM_007881.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600024135.mm.1	NM_007881.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0600024138.mm.1	TC0600003604.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600024138.mm.1	NM_007881.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600024138.mm.1	NM_007881.4	Refseq