Mm00494118_g1

Gene Symbol:

Vamp2 Ubr3

Gene Name:

vesicle-associated membrane protein 2

ubiquitin protein ligase E3 component n-recognin 3

Gene Aliases:

Syb-2, Syb2, sybII

1110059H15Rik, 4833421P10Rik, A130030D10Rik, AA409735, AA414972, AA422631, AI646861, AU016126, Zfp650, Znf650

Chromosome Location:

Chr.11: 69088528 - 69092381 on Build GRCm38

Chromosome Location:

Chr.2: 69896969 - 70024010 on Build GRCm38

Species:

Mouse

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Vamp2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009497.3	NP_033523.1	3 - 4	375		66
GenBank mRNA	AF007168.1	-	2 - 3	277		66
	AK090178.1	-	3 - 4	394		66
	BC039745.1	-	3 - 4	356	3156993	66
	BC055105.1	-	3 - 4	375	6596132	66
	U60150.1	-	3 - 4	337		66

Gene Symbol: Ubr3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	AK035617.1	-		134		66

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100000899.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vamp2
Click here to find siRNAs for Gene Ubr3

Gene Ontology Categories:

Process(es)

protein complex assembly
vesicle fusion
response to glucose
protein transport
synaptic vesicle exocytosis
vesicle-mediated transport
calcium ion regulated exocytosis
regulation of exocytosis
regulation of calcium ion-dependent exocytosis
cellular response to insulin stimulus
Golgi to plasma membrane protein transport
eosinophil degranulation
long-term synaptic potentiation
regulation of vesicle-mediated transport
membrane fusion
positive regulation of intracellular protein transport
regulation of delayed rectifier potassium channel activity

Function(s)

SNARE binding
SNAP receptor activity
protein binding
calmodulin binding
phospholipid binding
protein C-terminus binding
myosin binding
syntaxin-1 binding
syntaxin binding
protein complex binding
identical protein binding
ion channel binding
calcium-dependent protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100007552.mm.1	NM_009497.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007552.mm.1	NM_009497.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007552.mm.1	TC1100000899.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100007558.mm.1	NM_009497.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007558.mm.1	NM_009497.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007558.mm.1	TC1100000899.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100007559.mm.1	NM_009497.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007559.mm.1	NM_009497.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007559.mm.1	TC1100000899.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100007554.mm.1	NM_009497.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007554.mm.1	NM_009497.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1100007554.mm.1	TC1100000899.mm.1	MTA TC