Mm00499651_m1

• Gene Symbol: Cxxc1
• Gene Name: CXXC finger 1 (PHD domain)
• Gene Aliases: 2410002I16Rik, 5830420C16Rik, AI426635, Cfp1, Cgbp, PHF18
• Chromosome Location: Chr.18: 74216093 - 74221496 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cxxc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_028868.3	NP_083144.1	1 - 2	270		57
GenBank mRNA	AK010337.1	-	1 - 2	271		57
	AK083655.1	-	1 - 2	275		57
	AK146688.1	-	1 - 2	354		57
	AY099096.1	-	1 - 2	242		57
	BC030938.1	-	1 - 2	102	3980339	57

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800000787.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK010337.1, AK083655.1, AK146688.1, AY099096.1, BC030938.1, NM_028868.3 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cxxc1

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
histone H3-K4 methylation

Function(s)

cis-regulatory region sequence-specific DNA binding
DNA binding
zinc ion binding
histone methyltransferase activity (H3-K4 specific)
unmethylated CpG binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1800005628.mm.1	TC1800000787.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800005628.mm.1	NM_028868.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005628.mm.1	NM_028868.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005627.mm.1	TC1800000787.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800005627.mm.1	NM_028868.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005627.mm.1	NM_028868.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005630.mm.1	TC1800000787.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1800005630.mm.1	NM_028868.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005630.mm.1	NM_028868.3	Refseq