Mm00501580_m1

• Gene Symbol: Runx2
• Gene Name: runt related transcription factor 2
• Gene Aliases: AML3, Cbf, Cbfa-1, Cbfa1, LS3, Osf2, PEBP2aA, Pebp2a1, Pebpa2a
• Chromosome Location: Chr.17: 44495986 - 44814831 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Runx2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001145920.2	NP_001139392.1	2 - 3	1576		129
	NM_001146038.2	NP_001139510.1	4 - 5	841		129
	NM_001271627.1	NP_001258556.1	3 - 4	1005		129
	NM_001271630.1	NP_001258559.1	2 - 3	1104		129
	NM_009820.5	NP_033950.2	4 - 5	808		129
	NR_073392.1		3 - 4	592		129
	NR_073425.1		2 - 3	1104		129
GenBank mRNA	AF005936.1	-	3 - 4	959		129
	AF010284.1	-	4 - 5	808		129
	AF053954.1	-	3 - 4	422		129
	AF053955.1	-	2 - 3	256		129
	AK134925.1	-	2 - 3	362		129
	AK158925.1	-	2 - 3	1104		129
	D14636.1	-	2 - 3	1574		129
	D14637.1	-	2 - 3	1574		129
	DQ458792.1	-	3 - 4	593		129

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700002138.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Runx2

Panther Classification:

Molecular Function -

Runt transcription factor

Gene Ontology Categories:

Process(es)

skeletal system development
osteoblast differentiation
endochondral ossification
osteoblast fate commitment
chondrocyte differentiation
chondrocyte development
osteoblast development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of cell proliferation
positive regulation of gene expression
hemopoiesis
neuron differentiation
T cell differentiation
regulation of ossification
BMP signaling pathway
positive regulation of chondrocyte differentiation
embryonic forelimb morphogenesis
regulation of fibroblast growth factor receptor signaling pathway
odontogenesis of dentin-containing tooth
regulation of odontogenesis of dentin-containing tooth
regulation of osteoblast differentiation
positive regulation of osteoblast differentiation
positive regulation of ossification
negative regulation of smoothened signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
cell maturation
embryonic cranial skeleton morphogenesis
skeletal system morphogenesis
stem cell differentiation
cellular response to BMP stimulus
positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein binding
ATP binding
transcription factor binding
protein domain specific binding
histone deacetylase binding
bHLH transcription factor binding
transcription regulatory region DNA binding
repressing transcription factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	NM_001145920.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	NM_001146038.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	NM_001271627.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	NM_001271630.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	NM_009820.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	NR_073392.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	NR_073425.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700020008.mm.1	TC1700002138.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	507825	-	-