Mm00509002_m1

• Gene Symbol: Ccdc47
• Gene Name: coiled-coil domain containing 47
• Gene Aliases: 2610204L23Rik, C88307, asp4, calumin
• Chromosome Location: Chr.11: 106199354 - 106216367 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccdc47
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_026009.2	NP_080285.2	1 - 2	215		76
GenBank mRNA	AB040489.1	-	1 - 2	192		76
	AK011882.1	-	1 - 2	152		76
	AK078812.1	-	1 - 2	194		76
	AK132273.1	-	1 - 2	173		76
	BC120502.1	-	1 - 2	103	40129425	76
	BC137681.1	-	1 - 2	103	8860700	76
	CJ157793.1	-	1 - 2	215		76

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100004298.mm.1

Additional Information:

This assay is in the 5'UTR region of the AB040489.1,AK011882.1,AK078812.1,AK132273.1,BC120502.1,BC137681.1,NM_026009.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccdc47

Gene Ontology Categories:

Process(es)

osteoblast differentiation
ER overload response
endoplasmic reticulum organization
embryo development
post-embryonic development
ER-associated ubiquitin-dependent protein catabolic process
calcium ion homeostasis

Function(s)

calcium ion binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100036628.mm.1	NM_026009.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036628.mm.1	NM_026009.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036628.mm.1	TC1100004298.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100036626.mm.1	NM_026009.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036626.mm.1	NM_026009.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036626.mm.1	TC1100004298.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100036627.mm.1	NM_026009.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036627.mm.1	NM_026009.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036627.mm.1	TC1100004298.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100036629.mm.1	NM_026009.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036629.mm.1	NM_026009.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100036629.mm.1	TC1100004298.mm.1	MTA TC