Mm00509209_m1 Best Coverage

• Gene Symbol: Calcoco1
• Gene Name: calcium binding and coiled coil domain 1
• Gene Aliases: 1810009B06Rik, Cocoa, Gcap11, mKIAA1536
• Chromosome Location: Chr.15: 102706777 - 102722178 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Calcoco1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_026192.3	NP_080468.1	3 - 4	422		56
GenBank mRNA	AK007393.1	-	3 - 4	313		56
	AK018734.2	-	3 - 4	308		56
	AK035598.1	-	3 - 4	334		56
	AK087513.1	-	3 - 4	376		56
	AK220400.1	-	3 - 4	335		56
	AY131329.1	-	2 - 3	288		56
	BC054783.1	-	3 - 4	316	6815943	56

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500002301.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Calcoco1

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
signal transduction
Wnt signaling pathway
intracellular steroid hormone receptor signaling pathway
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of nucleic acid-templated transcription

Function(s)

chromatin binding
transcription cofactor activity
transcription coactivator activity
protein binding
beta-catenin binding
protein C-terminus binding
ligand-dependent nuclear receptor transcription coactivator activity
sequence-specific DNA binding
transcription regulatory region DNA binding
armadillo repeat domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500019075.mm.1	NM_026192.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500019075.mm.1	NM_026192.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500019075.mm.1	TC1500002301.mm.1	MTA TC