Mm00518789_g1

• Gene Symbol: Apobec3
• Gene Name: apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
• Gene Aliases: Arp3, BC003314, Cem15, Rfv3
• Chromosome Location: Chr.15: 79892408 - 79908905 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apobec3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001160415.1	NP_001153887.1	3 - 4	583		79
	NM_030255.3	NP_084531.2	3 - 4	583		79
GenBank mRNA	AB461446.1	-	3 - 4	474		79
	AB461447.1	-	3 - 4	474		79
	AB461448.1	-	3 - 4	474		79
	AB461449.1	-	3 - 4	474		79
	AK044394.1	-	3 - 4	543		79
	AK049256.1	-	3 - 4	543		79
	AK049998.1	-		537		79
	AK153719.1	-	3 - 4	533		79
	AK154035.1	-		588		79
	AK162766.1	-	1 - 2	220		79
	AK167986.1	-	3 - 4	589		79
	BC003314.1	-	3 - 4	565	3155422	79
	EU707568.1	-	3 - 4	474		79
	EU707570.1	-	3 - 4	474		79
	EU707571.1	-	2 - 3	306		79
	GQ871501.1	-	3 - 4	471		79
	GQ871502.1	-	2 - 3	414		79
	GQ871503.1	-	3 - 4	471		79

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500000688.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apobec3

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

hematopoietic progenitor cell differentiation
immune system process
metabolic process
negative regulation of transposition
negative regulation of viral genome replication
innate immune response
defense response to virus

Function(s)

catalytic activity
GTP cyclohydrolase activity
protein binding
tRNA-specific adenosine deaminase activity
zinc ion binding
hydrolase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
N-cyclopropylmelamine deaminase activity
N-cyclopropylammeline deaminase activity
N-cyclopropylammelide alkylamino hydrolase activity
2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase activity
tRNA-specific adenosine-37 deaminase activity
archaeal-specific GTP cyclohydrolase activity
poly(A) RNA binding
metal ion binding
deoxycytidine deaminase activity
tRNA-specific adenosine-34 deaminase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500005139.mm.1	NM_001160415.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005139.mm.1	NM_001160415.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005139.mm.1	NM_030255.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005139.mm.1	NM_030255.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005139.mm.1	TC1500000688.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500005138.mm.1	NM_001160415.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005138.mm.1	NM_001160415.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005138.mm.1	NM_030255.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005138.mm.1	NM_030255.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005138.mm.1	TC1500000688.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500005140.mm.1	NM_001160415.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005140.mm.1	NM_001160415.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005140.mm.1	NM_030255.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005140.mm.1	NM_030255.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005140.mm.1	TC1500000688.mm.1	MTA TC