Mm00519760_m1

• Gene Symbol: Carf
• Gene Name: calcium response factor
• Gene Aliases: Als2cr8, ECBRC-FC1, ECBRC-FC2
• Chromosome Location: Chr.1: 60098221 - 60153953 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Carf
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001285463.1	NP_001272392.1	13 - 14	1598		72
	NM_001285473.1	NP_001272402.1	9 - 10	1188		72
	NM_139150.5	NP_631889.1	11 - 12	1471		72
	NR_104344.1		7 - 8	923		72
GenBank mRNA	AB221600.1	-	10 - 11	1254		72
	AF454947.1	-	11 - 12	1440		72
	AK044738.1	-	13 - 14	1599		72
	BC138644.1	-	10 - 11	1377	8861664	72
	BC138645.1	-	10 - 11	1377	8861665	72
	BC145350.1	-	10 - 11	1373		72
	EU170502.1	-	9 - 10	1169		72
	EU170503.1	-	7 - 8	904		72

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100000465.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Carf

Panther Classification:

Molecular Function -

DNA-binding transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
cellular response to potassium ion
positive regulation of transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter in response to calcium ion
cellular response to calcium ion

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100003816.mm.1	NM_001285463.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100003816.mm.1	NM_001285473.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100003816.mm.1	NM_139150.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0100003816.mm.1	NR_104344.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100003816.mm.1	TC0100000465.mm.1	MTA TC