Mm00522100_m1 Best Coverage

• Gene Symbol: Mbd1
• Gene Name: methyl-CpG binding domain protein 1
• Gene Aliases: Cxxc3, PCM1
• Chromosome Location: Chr.18: 74267615 - 74282734 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mbd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013594.2	NP_038622.2	2 - 3	282		66
GenBank mRNA	AF072240.1	-	2 - 3	285		66
	AK004624.2	-	2 - 3	283		66
	AK156401.1	-	2 - 3	297		66
	AK162858.1	-	2 - 3	282		66
	BC069837.1	-	2 - 3	298	30435760	66

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800000788.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Mbd1

Gene Ontology Categories:

Process(es)

DNA methylation
transcription, DNA-templated
regulation of transcription, DNA-templated
negative regulation of gene expression
negative regulation of astrocyte differentiation

Function(s)

DNA binding
chromatin binding
protein binding
zinc ion binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1800005653.mm.1	NM_013594.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005653.mm.1	NM_013594.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1800005653.mm.1	TC1800000788.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	828543	-	-