Mm00547171_g1

• Gene Symbol: Smpd4
• Gene Name: sphingomyelin phosphodiesterase 4
• Gene Aliases: 4122402O22Rik, mKIAA1418
• Chromosome Location: Chr.16: 17619354 - 17644830 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smpd4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001164609.1	NP_001158081.1	6 - 7	579		101
	NM_001164610.1	NP_001158082.1	6 - 7	579		101
	NM_001164611.1	NP_001158083.1	6 - 7	579		101
	NM_029945.3	NP_084221.2	6 - 7	579		101
GenBank mRNA	AK019466.2	-	6 - 7	580		101
	AK031029.1	-	6 - 7	573		101
	AK031685.1	-	6 - 7	578		101
	AK035892.1	-	6 - 7	571		101
	AK036055.1	-	6 - 7	571		101
	AK036380.1	-	6 - 7	575		101
	AK129354.1	-	6 - 7	556		101
	AK138720.1	-	6 - 7	553		101
	AK164234.1	-	6 - 7	571		101
	AK164456.1	-	4 - 5	1044		101
	BC026767.1	-	6 - 7	552	5137008	101

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1600000221.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK164456.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smpd4

Panther Classification:

Molecular Function -

hydrolase, phosphodiesterase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

sphingomyelin catabolic process
glycerophospholipid catabolic process
ceramide biosynthetic process
cellular response to tumor necrosis factor

Function(s)

sphingomyelin phosphodiesterase activity
hydrolase activity
metal ion binding
sphingomyelin phosphodiesterase D activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_001164609.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_001164609.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_001164610.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_001164610.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_001164611.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_001164611.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_029945.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	NM_029945.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001930.mm.1	TC1600000221.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_001164609.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_001164609.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_001164610.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_001164610.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_001164611.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_001164611.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_029945.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	NM_029945.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001933.mm.1	TC1600000221.mm.1	MTA TC