Mm00551234_m1

• Gene Symbol: Tdp1
• Gene Name: tyrosyl-DNA phosphodiesterase 1
• Gene Aliases: 2810481F14Rik, 4921509N21Rik, AI838772, AW493413, E430034L06Rik, MLZ-501, SCAN1
• Chromosome Location: Chr.12: 99884515 - 99955219 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tdp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_028354.4	NP_082630.2	11 - 12	1412		65
GenBank mRNA	AK013427.1	-	10 - 11	887		65
	AK014855.1	-	11 - 12	1392		65
	AK033868.1	-	11 - 12	1410		65
	BC019804.1	-	8 - 9	736	4018534	65
	BC065162.1	-	10 - 11	1382	6402921	65

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200000988.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tdp1

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Process(es)

single strand break repair
DNA repair
double-strand break repair
cellular response to DNA damage stimulus

Function(s)

double-stranded DNA binding
single-stranded DNA binding
cyclic-nucleotide phosphodiesterase activity
3',5'-cyclic-AMP phosphodiesterase activity
calmodulin-dependent cyclic-nucleotide phosphodiesterase activity
cGMP-stimulated cyclic-nucleotide phosphodiesterase activity
cGMP-inhibited cyclic-nucleotide phosphodiesterase activity
photoreceptor cyclic-nucleotide phosphodiesterase activity
nuclease activity
exonuclease activity
phosphoric diester hydrolase activity
hydrolase activity
3'-tyrosyl-DNA phosphodiesterase activity
7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity
inositol phosphosphingolipid phospholipase activity
inositol phosphorylceramide phospholipase activity
mannosyl-inositol phosphorylceramide phospholipase activity
mannosyl-diinositol phosphorylceramide phospholipase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200006885.mm.1	NM_028354.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200006885.mm.1	NM_028354.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1200006885.mm.1	TC1200000988.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200006886.mm.1	NM_028354.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200006886.mm.1	NM_028354.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1200006886.mm.1	TC1200000988.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200006882.mm.1	NM_028354.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200006882.mm.1	NM_028354.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1200006882.mm.1	TC1200000988.mm.1	MTA TC