Mm00617899_m1 Best Coverage

• Gene Symbol: Atp1a2
• Gene Name: ATPase, Na+/K+ transporting, alpha 2 polypeptide
• Gene Aliases: AW060654, Atpa-3, mKIAA0778
• Chromosome Location: Chr.1: 172271709 - 172298064 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atp1a2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_178405.3	NP_848492.1	20 - 21	3012		69
GenBank mRNA	AK129212.1	-	20 - 21	2925		69
	AK137602.1	-	20 - 21	2948		69
	AK147331.1	-	20 - 21	2944		69
	AK148775.1	-	19 - 20	3134		69
	AK161840.1	-	20 - 21	2944		69
	AK164509.1	-	20 - 21	2948		69
	AK168703.1	-	20 - 21	2944		69
	BC025807.1	-	9 - 10	1240		69
	BC036127.1	-	20 - 21	2936	4955003	69
	BC041774.1	-	17 - 18	2662		69

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100003566.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Ion Channel, Transporter, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atp1a2

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

neurotransmitter uptake
regulation of the force of heart contraction
regulation of respiratory gaseous exchange by neurological system process
transport
ion transport
potassium ion transport
sodium ion transport
cellular sodium ion homeostasis
regulation of muscle contraction
regulation of smooth muscle contraction
regulation of striated muscle contraction
regulation of blood pressure
adult locomotory behavior
visual learning
potassium ion import
ATP hydrolysis coupled proton transport
regulation of vasoconstriction
cellular potassium ion homeostasis
response to nicotine
sodium ion export from cell
locomotion
negative regulation of heart contraction
negative regulation of striated muscle contraction
negative regulation of cytosolic calcium ion concentration
cellular response to mechanical stimulus
cellular response to steroid hormone stimulus
regulation of cardiac muscle cell contraction
negative regulation of calcium ion transmembrane transport
negative regulation of calcium:sodium antiporter activity
response to glycoside

Function(s)

nucleotide binding
sodium:potassium-exchanging ATPase activity
protein binding
ATP binding
hydrolase activity
cation-transporting ATPase activity
metal ion binding
chaperone binding
steroid hormone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100029300.mm.1	NM_178405.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100029300.mm.1	NM_178405.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0100029300.mm.1	TC0100003566.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100029298.mm.1	NM_178405.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100029298.mm.1	NM_178405.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0100029298.mm.1	TC0100003566.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	837463	-	-