Mm00625148_m1

• Gene Symbol: Ogfod1
• Gene Name: 2-oxoglutarate and iron-dependent oxygenase domain containing 1
• Gene Aliases: 4930415J21Rik, AA387199, AA939912, AW061076, mKIAA1612
• Chromosome Location: Chr.8: 94037141 - 94067923 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ogfod1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001093757.1	NP_001087226.1	2 - 3	393		127
	NM_177767.4	NP_808435.3	2 - 3	393		127
GenBank mRNA	AK029629.1	-	2 - 3	394		127
	AK122532.1	-	2 - 3	297		127
	AK156765.1	-	2 - 3	363		127
	AK164189.1	-	2 - 3	280		127
	AK166343.1	-	2 - 3	316		127
	BB615031.1	-	2 - 3	394		127
	BC040267.1	-	2 - 3	353	5364674	127

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800001089.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ogfod1

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein, histone modifying enzyme

Gene Ontology Categories:

Process(es)

regulation of translational termination
cell proliferation
protein hydroxylation
peptidyl-proline hydroxylation
stress granule assembly
oxidation-reduction process

Function(s)

sulfonate dioxygenase activity
iron ion binding
oxidoreductase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
procollagen-proline dioxygenase activity
L-ascorbic acid binding
peptidyl-proline dioxygenase activity
peptidyl-proline 3-dioxygenase activity
hypophosphite dioxygenase activity
DNA-N1-methyladenine dioxygenase activity
metal ion binding
dioxygenase activity
C-19 gibberellin 2-beta-dioxygenase activity
C-20 gibberellin 2-beta-dioxygenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0800008393.mm.1	NM_001093757.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008393.mm.1	NM_001093757.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008393.mm.1	NM_177767.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008393.mm.1	NM_177767.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008393.mm.1	TC0800001089.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800008386.mm.1	NM_001093757.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008386.mm.1	NM_001093757.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008386.mm.1	NM_177767.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008386.mm.1	NM_177767.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008386.mm.1	TC0800001089.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800008382.mm.1	NM_001093757.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008382.mm.1	NM_001093757.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008382.mm.1	NM_177767.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008382.mm.1	NM_177767.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008382.mm.1	TC0800001089.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800008388.mm.1	NM_001093757.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008388.mm.1	NM_001093757.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008388.mm.1	NM_177767.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008388.mm.1	NM_177767.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008388.mm.1	TC0800001089.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800008390.mm.1	NM_001093757.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008390.mm.1	NM_001093757.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008390.mm.1	NM_177767.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008390.mm.1	NM_177767.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0800008390.mm.1	TC0800001089.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	787545	-	-