Mm00627240_m1

• Gene Symbol: Sema3a
• Gene Name: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
• Gene Aliases: Hsema-I, SEMA1, SemD, Semad, coll-1
• Chromosome Location: Chr.5: 13125371 - 13606234 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sema3a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001243072.1	NP_001230001.1	16 - 17	2100		56
	NM_001243073.1	NP_001230002.1	16 - 17	1940		56
	NM_009152.4	NP_033178.2	15 - 16	2368		56
GenBank mRNA	AK140817.1	-	16 - 17	1941		56
	BC057588.1	-	15 - 16	2015	6416990	56
	BC090844.1	-	16 - 17	2100	30532393	56
	D85028.2	-	15 - 16	2370		56
	L40484.1	-	12 - 13	1401		56
	L41541.1	-	15 - 16	1719		56

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500000084.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sema3a

Panther Classification:

Molecular Function -

membrane-bound signaling molecule, intercellular signal molecule

Gene Ontology Categories:

Process(es)

neuron migration
regulation of heart rate
apoptotic process
multicellular organism development
nervous system development
axon guidance
axonal fasciculation
motor neuron axon guidance
negative regulation of epithelial cell migration
facial nerve structural organization
trigeminal nerve structural organization
nerve development
olfactory bulb development
branchiomotor neuron axon guidance
gonadotrophin-releasing hormone neuronal migration to the hypothalamus
cell differentiation
negative regulation of axon extension
ventral trunk neural crest cell migration
dendrite morphogenesis
regulation of axon extension involved in axon guidance
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
negative chemotaxis
axonogenesis involved in innervation
dichotomous subdivision of terminal units involved in salivary gland branching
sympathetic ganglion development
trigeminal ganglion development
semaphorin-plexin signaling pathway
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance
neural crest cell migration involved in sympathetic nervous system development
facioacoustic ganglion development
positive regulation of male gonad development
positive regulation of neuron migration

Function(s)

semaphorin receptor binding
neuropilin binding
chemorepellent activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0500000764.mm.1	TC0500000084.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500000764.mm.1	NM_001243072.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000764.mm.1	NM_001243072.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000764.mm.1	NM_001243073.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000764.mm.1	NM_001243073.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000764.mm.1	NM_009152.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500000764.mm.1	NM_009152.4	Refseq