Mm00628223_m1

• Gene Symbol: Arid5a
• Gene Name: AT rich interactive domain 5A (MRF1-like)
• Gene Aliases: D430024K22Rik, Mrf1
• Chromosome Location: Chr.1: 36307706 - 36324036 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Arid5a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001172205.1	NP_001165676.1	1 - 2	109		80
	NM_145996.4	NP_666108.2	1 - 2	109		80
	NR_033310.1		1 - 2	109		80
GenBank mRNA	AK029237.1	-	1 - 2	88		80
	AK085015.1	-	1 - 2	89		80
	AK149839.1	-	1 - 2	89		80
	AK155555.1	-	1 - 2	86		80
	AK156376.1	-	1 - 2	89		80
	AK156934.1	-	1 - 2	89		80
	AK157607.1	-	1 - 2	89		80
	BC027152.1	-	1 - 2	73	4935168	80

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100000240.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK085015.1, AK149839.1, AK156376.1, AK156934.1, AK157607.1, BC027152.1, NM_001172205.1, NM_145996.4 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Arid5a

Gene Ontology Categories:

Process(es)

chondrocyte differentiation
transcription, DNA-templated
regulation of transcription, DNA-templated
positive regulation of histone acetylation
positive regulation of transcription by RNA polymerase II

Function(s)

transcription cis-regulatory region binding
DNA binding
chromatin binding
transcription factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	TC0100000240.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NM_001172205.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NM_001172205.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NM_001172206.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NM_001172206.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NM_145996.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NM_145996.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NR_033310.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001559.mm.1	NR_033310.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	TC0100000240.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NM_001172205.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NM_001172205.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NM_001172206.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NM_001172206.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NM_145996.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NM_145996.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NR_033310.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100001563.mm.1	NR_033310.1	Refseq