Mm00803088_m1

• Gene Symbol: Nr1i2
• Gene Name: nuclear receptor subfamily 1, group I, member 2
• Gene Aliases: PXR, PXR.1, PXR.2, PXR1, SXR, mPXR
• Chromosome Location: Chr.16: 38248321 - 38294851 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr1i2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001098404.1	NP_001091874.1	1 - 2	309		112
	NM_010936.3	NP_035066.1	1 - 2	309		112
GenBank mRNA	AF031814.1	-	1 - 2	124		112
	AI746915.1	-	1 - 2	309		112
	AK011108.1	-	1 - 2	278		112
	AK018630.1	-	1 - 2	309		112

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1600001602.mm.1

Additional Information:

This assay is in the 5'UTR region of the AF031814.1, AK011108.1, AK018630.1, NM_001098404.1, NM_010936.3 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr1i2

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
xenobiotic metabolic process
positive regulation of gene expression
intracellular receptor signaling pathway
xenobiotic catabolic process
xenobiotic transport
steroid hormone mediated signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
xenobiotic export

Function(s)

RNA polymerase II transcription regulatory region sequence-specific DNA binding
DNA-binding transcription activator activity, RNA polymerase II-specific
DNA binding
DNA-binding transcription factor activity
steroid hormone receptor activity
nuclear receptor activity
protein binding
zinc ion binding
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1600013087.mm.1	TC1600001602.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013087.mm.1	NM_001098404.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013087.mm.1	NM_001098404.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013087.mm.1	NM_010936.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013087.mm.1	NM_010936.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013085.mm.1	TC1600001602.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013085.mm.1	NM_001098404.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013085.mm.1	NM_001098404.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013085.mm.1	NM_010936.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013085.mm.1	NM_010936.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013086.mm.1	TC1600001602.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013086.mm.1	NM_001098404.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013086.mm.1	NM_001098404.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013086.mm.1	NM_010936.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013086.mm.1	NM_010936.3	Refseq