Mm00803299_m1 Best Coverage

• Gene Symbol: Rfx3
• Gene Name: regulatory factor X, 3 (influences HLA class II expression)
• Gene Aliases: C230093O12Rik, MRFX3
• Chromosome Location: Chr.19: 27761718 - 28011698 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rfx3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001166414.1	NP_001159886.1	12 - 13	1522		91
	NM_011265.3	NP_035395.2	11 - 12	1563		91
GenBank mRNA	AK030008.1	-	13 - 14	1595		91
	AK132267.1	-	7 - 8	888		91
	AK140928.1	-	10 - 11	1371		91
	BC017598.1	-	11 - 12	1537	4483833	91

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900001316.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rfx3

Panther Classification:

Molecular Function -

winged helix/forkhead transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
multicellular organism development
determination of left/right symmetry
cell differentiation
endocrine pancreas development
cilium assembly
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
cell maturation
regulation of insulin secretion
cilium-dependent cell motility
epithelial cilium movement involved in determination of left/right asymmetry
type B pancreatic cell maturation
positive regulation of type B pancreatic cell development

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
sequence-specific DNA binding
transcription regulatory region DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900011733.mm.1	NM_001166414.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011733.mm.1	NM_001166414.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011733.mm.1	NM_011265.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011733.mm.1	NM_011265.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011733.mm.1	TC1900001316.mm.1	MTA TC